BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026F07LP1|AL428584
(824 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1537 1358 0.0
>3x_Contig1537
Length = 10796
Score = 1358 bits (661), Expect = 0.0
Identities = 764/825 (92%), Gaps = 2/825 (0%)
Strand = Plus / Plus
Query: 1 gatcatttctttttagaatgaaagaaggagaacttggacttctttaattcatttgatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9729 gatcatttctttttagaatgaaagaaggagaacttggacttctttaattcatttgatttc 9788
Query: 61 tgattttgttcgttattagaatctgatggtagtttgtcctgtggttccacyscgggaaag 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 9789 tgattttgttcgttattagaatctgatggtagtttgtcctgtggttccactg-gggaaag 9847
Query: 121 gtttgttttcgacgaagatggtggattggttgatgatatatcasattctaatggtggagg 180
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 9848 gtttgttttcgacgaagatggtggattggttgatgatatatcagattctaatggtggagg 9907
Query: 181 agatgttgaatgggaatyagagtttgagaaggaattagagttggaagttgaggttagatt 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9908 agatgttgaatgggaattagagtttgagaaggaattagagttggaagttgaggttagatt 9967
Query: 241 tacatttsamtttsggtttgamttagaattcgatccamacygctgtycctgcygcygttg 300
||||||| | ||| ||||||| ||||||||||||||| || ||||| ||||| || ||||
Sbjct: 9968 tacatttgaatttgggtttgaattagaattcgatccaaactgctgttcctgctgctgttg 10027
Query: 301 tyggmmagcmtttggmggtctttcamtcacagaggcagtagactcaccctcgtcsagcat 360
| || ||| ||||| ||||||| | |||||||||||||||||||||||||||| |||||
Sbjct: 10028 ttggaaagcatttggaggtctttgaatcacagaggcagtagactcaccctcgtcgagcat 10087
Query: 361 tgtactggtacygacttstctcatcccgtytggcaccggttggyacygtygtcgtggttg 420
||||||||||| || || ||||||||||| ||| ||||||||| || || || |||||||
Sbjct: 10088 tgtactggtactgatttgtctcatcccgtttggaaccggttggtactgttgttgtggttg 10147
Query: 421 tctyggcmaayctcacagtcggccttgtcaaccasttctcaytggmttmsggttaccgtt 480
| | ||| || | | ||| |||||||| ||||| |||||| ||| || ||||||||||
Sbjct: 10148 tgttggcaaatttgatagttggccttgtgaaccagttctcattggattagggttaccgtt 10207
Query: 481 cagtcttggcatggmaccattatggtaattcatggaaagtggagggaggttaccagacag 540
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10208 cagtcttggcatggaaccattatggtaattcatggaaagtggagggaggttaccagacag 10267
Query: 541 agaattgaacctctgttgaccagttggtgcttgtsgcatgttgamatcgcttagcatcgt 600
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 10268 agaattgaacctctgttgaccagttggtgcttgtggcatgttgaaatcgcttagcatcgt 10327
Query: 601 atttcatggatttcttaacattggcatattactgcgcctattcttcctgcttgtctttyg 660
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 10328 atttgatggatttcttaacattggcatattactgcgcctattcttcctgcttgttttttg 10387
Query: 661 gmatgtcttaggtccaaacccattagmtcccattggtgctgccccatctaacatatttyc 720
| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 10388 gaatgttttaggtccaaacccattagatcccattggtgctgccccatctaacatattttg 10447
Query: 721 tcatattccaaacccgttcattggtctttstccacctccgttsattccaacaacggaccc 780
| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 10448 tgatattccaaacccgttcattggtctttgtccacctccgttgattccaacaacggaccc 10507
Query: 781 agagtagcctcctacgcccggcattcctggsaga-ctacacttga 824
|||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 10508 agagtagcctcctacgcccggcattcctgggagacctacacttga 10552
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.35
Gapped
Lambda K H
1.42 0.718 1.35
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3711
Number of Sequences: 1807
Number of extensions: 3711
Number of successful extensions: 78
Number of sequences better than 1.0e-20: 1
length of query: 824
length of database: 10,358,551
effective HSP length: 16
effective length of query: 808
effective length of database: 10,329,639
effective search space: 8346348312
effective search space used: 8346348312
T: 0
A: 40
X1: 5 (10.3 bits)
X2: 14 (28.8 bits)
S1: 11 (23.1 bits)
S2: 49 (101.2 bits)